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Regenerate docs/module-graph for the fs-patch package, add apply_patch to the shipped Web composition tool list, and refresh the Web tool-schema, system-prompt, and collapse-timing pins that CI compares against the default tool set. Cover the symbolic-link preflight refusal through a provider lstat double and the atomic-write parent failure through a regular-file blocker, so Windows coverage no longer depends on POSIX-only tests.